Loading configuration from: /home/aaichert/nc_local/work/xray-epipolar-consistency/tools/config_standard_calc04.json --- Step 1: Preprocessing & Baseline Normalization --- Loading data from: /home/aaichert/nc_local/work/2026_PhD_seminar/geometry_excercises/input/waygate/ Image data will be converted to attenuation projections (-log(I/I0)). Applying 1x1 binning... Pre-computing global I0 as the maximum intensity across all projections... Global I0 determined: 21376.0 Loading geometry and computing normalization... Computed iso-center: [-1.39492382e-15 1.95490009e-16 -8.89325042e-17] Estimated plane normal vector: [ 0.00000000e+00 -1.00000000e+00 1.11022302e-16] Maximum distance delta from iso-center along normal: 4.392469301819801 mm Calibration problem setup complete. Saved configuration to /home/aaichert/nc_local/work/2026_PhD_seminar/geometry_excercises/input/waygate/standard_calc04/processed/ecc.json Preprocessing completed. --- Step 2: Calibration Optimization --- Loading binned images and setting up RadonIntermediate objects... Initializing MetricRadonIntermediate... === Preflight System Analysis === Original Image Size (Before Binning): 1494 x 1256 Binned Image Size (After Binning): 1494 x 1256 (Factor: 1x) Radon Intermediate Size (Alpha): 1533 Radon Intermediate Size (T): 1952 ================================= Preflight: Generating baseline cost matrix (cost_image.png)... Preflight: Generating baseline geometry plot (geometry.svg)... Geometry visualization saved to: /home/aaichert/nc_local/work/2026_PhD_seminar/geometry_excercises/input/waygate/standard_calc04/processed/geometry.svg Generated dashboard HTML page: /home/aaichert/nc_local/work/2026_PhD_seminar/geometry_excercises/input/waygate/standard_calc04/processed/report_02_optimization.html Preflight: Sweeping parameter detector_shift_u... Preflight: Sweeping parameter detector_shift_v... Preflight: Sweeping parameter detector_tilt... Preflight: Sweeping parameter detector_slant... Preflight: Sweeping parameter detector_skew... Preflight: Sweeping parameter axis_tilt_x... Preflight: Sweeping parameter axis_tilt_y... Preflight: Sweeping parameter axis_offset_x... Preflight: Sweeping parameter axis_offset_y... Generated preflight dashboard HTML: /home/aaichert/nc_local/work/2026_PhD_seminar/geometry_excercises/input/waygate/standard_calc04/processed/report_01_preflight.html --- Running Optimization Stage 1 (Powell) --- Active parameters: ['detector_tilt', 'axis_offset_x', 'axis_offset_y'] Initial Cost before Stage 1: 1329.805298 Iteration 1 | Cost: 1190.554321 | Params: [ 0.06174837 -0.12287652 -0.07059423] Iteration 2 | Cost: 1179.270020 | Params: [ 0.05986338 -0.09280746 -0.08482386] Iteration 3 | Cost: 1178.219116 | Params: [ 0.05921521 -0.08015043 -0.09135454] Iteration 4 | Cost: 1178.216919 | Params: [ 0.05917765 -0.07980217 -0.0916115 ] Iteration 5 | Cost: 1178.218384 | Params: [ 0.05910685 -0.07980187 -0.09161182] Stage 1 Complete. Final Cost: 1178.218384 --- Running Optimization Stage 2 (L-BFGS-B) --- Active parameters: ['detector_tilt', 'detector_slant', 'detector_skew', 'axis_tilt_x', 'axis_tilt_y', 'axis_offset_x', 'axis_offset_y'] Initial Cost before Stage 2: 1178.218384 Iteration 1 | Cost: 1157.918945 | Params: [ 0.03755655 0.0209317 -0.0209317 0.01046585 0.01046585 -0.1051313 -0.10247116] Iteration 2 | Cost: 923.023682 | Params: [ 0.08426766 0.13227017 0.00911641 -0.0053026 -0.01537658 0.00675379 -0.00889692] Iteration 3 | Cost: 908.544678 | Params: [ 0.07064468 0.14830325 -0.00541375 -0.00134188 -0.00667397 0.00567031 0.00923902] Iteration 4 | Cost: 904.813049 | Params: [ 0.06010855 0.14368079 -0.01541633 0.00197902 -0.00052609 -0.00445414 0.00465904] Iteration 5 | Cost: 904.035706 | Params: [ 0.05748056 0.14587708 -0.01967927 0.00204947 0.00062372 0.00121191 -0.00027835] Iteration 6 | Cost: 903.890198 | Params: [ 0.05705482 0.1449126 -0.02065707 0.00189915 0.00062345 0.00086967 0.00110096] Iteration 7 | Cost: 903.875671 | Params: [ 0.05695373 0.14484548 -0.02116305 0.0018275 0.00036761 0.00068871 0.00127996] Iteration 8 | Cost: 903.805908 | Params: [ 0.05712873 0.14480814 -0.02325729 0.00114389 -0.00147105 0.00036458 0.00150732] Iteration 9 | Cost: 903.762207 | Params: [ 0.05701197 0.14483507 -0.02611295 0.000681 -0.00281535 0.0004628 0.00151276] Iteration 10 | Cost: 903.753967 | Params: [ 0.0571882 0.14489651 -0.02678411 -0.00018787 -0.00293584 0.00053023 0.00127583] Iteration 11 | Cost: 903.753906 | Params: [ 0.0571884 0.14489679 -0.02678381 -0.00018631 -0.00293574 0.00053036 0.00127616] Iteration 12 | Cost: 903.753906 | Params: [ 0.0571884 0.14489679 -0.02678381 -0.00018631 -0.00293574 0.00053036 0.00127616] Stage 2 Complete. Final Cost: 903.753906 Optimization Complete (Method: Powell + L-BFGS-B)! Status: CONVERGENCE: RELATIVE REDUCTION OF F <= FACTR*EPSMCH Final Cost: 903.753906 result.jac: [-2.38037109 -2.68554664 0.97656244 -3.02124 0.09155273 -0.24414061 -0.45776364] Saved convergence curve to: /home/aaichert/nc_local/work/2026_PhD_seminar/geometry_excercises/input/waygate/standard_calc04/processed/plots/convergence_curve.png Saved optimized parameters to: /home/aaichert/nc_local/work/xray-epipolar-consistency/tools/parameters_optimized_standard_calc04.json Generating optimized outputs... Post-opt: Sweeping parameter detector_shift_u... Post-opt: Sweeping parameter detector_shift_v... Post-opt: Sweeping parameter detector_tilt... Post-opt: Sweeping parameter detector_slant... Post-opt: Sweeping parameter detector_skew... Post-opt: Sweeping parameter axis_tilt_x... Post-opt: Sweeping parameter axis_tilt_y... Post-opt: Sweeping parameter axis_offset_x... Post-opt: Sweeping parameter axis_offset_y... Generating 21 3D Sensitivity Sweeps post-optimization... Post-opt 3D sweep: detector_tilt vs detector_slant... Post-opt 3D sweep: detector_tilt vs detector_skew... Post-opt 3D sweep: detector_tilt vs axis_tilt_x... Post-opt 3D sweep: detector_tilt vs axis_tilt_y... Post-opt 3D sweep: detector_tilt vs axis_offset_x... Post-opt 3D sweep: detector_tilt vs axis_offset_y... Post-opt 3D sweep: detector_slant vs detector_skew... Post-opt 3D sweep: detector_slant vs axis_tilt_x... Post-opt 3D sweep: detector_slant vs axis_tilt_y... Post-opt 3D sweep: detector_slant vs axis_offset_x... Post-opt 3D sweep: detector_slant vs axis_offset_y... Post-opt 3D sweep: detector_skew vs axis_tilt_x... Post-opt 3D sweep: detector_skew vs axis_tilt_y... Post-opt 3D sweep: detector_skew vs axis_offset_x... Post-opt 3D sweep: detector_skew vs axis_offset_y... Post-opt 3D sweep: axis_tilt_x vs axis_tilt_y... Post-opt 3D sweep: axis_tilt_x vs axis_offset_x... Post-opt 3D sweep: axis_tilt_x vs axis_offset_y... Post-opt 3D sweep: axis_tilt_y vs axis_offset_x... Post-opt 3D sweep: axis_tilt_y vs axis_offset_y... Post-opt 3D sweep: axis_offset_x vs axis_offset_y... Saved optimized cost image to: /home/aaichert/nc_local/work/2026_PhD_seminar/geometry_excercises/input/waygate/standard_calc04/processed/cost_image_optimized.png Saved optimized geometry visualization to: /home/aaichert/nc_local/work/2026_PhD_seminar/geometry_excercises/input/waygate/standard_calc04/processed/geometry_optimized.svg Generated dashboard HTML page: /home/aaichert/nc_local/work/2026_PhD_seminar/geometry_excercises/input/waygate/standard_calc04/processed/report_02_optimization.html --- Step 3: Export Optimized Matrices to OMPL --- Exported 1500 optimized matrices to OMPL: /home/aaichert/nc_local/work/2026_PhD_seminar/geometry_excercises/input/waygate/standard_calc04/processed/geometry_optimized.ompl Exported optimized geometry in pcproj format to: /home/aaichert/nc_local/work/2026_PhD_seminar/geometry_excercises/input/waygate/standard_calc04/processed/geometry_optimized.pcproj ============================================== PIPELINE TIMING SUMMARY ============================================== DTR Computation Time: 12.172 seconds Time to Create All Plots: 101.606 seconds - Pre-flight & Sweeps: 21.066 seconds - Post-optimization: 80.540 seconds Time to Optimize: 5.254 seconds ---------------------------------------------- Total Pipeline Execution: 125.848 seconds ============================================== --- Pipeline Completed Successfully --- Generated dashboard HTML page: /home/aaichert/nc_local/work/2026_PhD_seminar/geometry_excercises/input/waygate/standard_calc04/processed/report_02_optimization.html