=== CT Reconstruction Tool Started ===
Loading configuration: /home/aaichert/nc_local/work/xray-epipolar-consistency/tools/config_reconstruct_uncorrected_fdk.json
OMPL path: /home/aaichert/nc_local/work/2026_PhD_seminar/geometry_excercises/input/waygate/standard_calc04/processed/geometry_uncorrected.ompl
Reading metadata from:
  PCA: /home/aaichert/nc_local/work/2026_PhD_seminar/geometry_excercises/input/waygate/standard_calc04/standard_calc04_bin2.pca
  PCR: /home/aaichert/nc_local/work/2026_PhD_seminar/geometry_excercises/input/waygate/standard_calc04/standard_calc04_bin2_input.pcr

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             METADATA INFORMATION            
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Volume Dimensions (X, Y, Z):   1494 x 1494 x 32
Voxel Spacing (mm):            0.007000
Detector Dimensions (W, H):    1494 x 1256
Detector Spacing (mm):          0.200000
==============================================

Loading optimized matrices from OMPL...
Loaded 1500 projection matrices.
Searching for projection TIFF files in: /home/aaichert/nc_local/work/2026_PhD_seminar/geometry_excercises/input/waygate/standard_calc04_complete_bin2 ...
Selected first 1500 TIFF projections for reconstruction.

--- Step 1: Geometry Verification (SVG Overlay) ---
Generating verification SVG at: /home/aaichert/nc_local/work/2026_PhD_seminar/geometry_excercises/input/waygate/standard_calc04/processed/geometry_verification.svg using first view...
Geometry verification SVG saved successfully.

--- Step 2: Setting up ASTRA geometries ---
Decomposing projection matrices to ASTRA vectors...

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             RECONSTRUCTION PARAMS            
==============================================
Method:                        FDK (ASTRA CUDA)
Convert to Attenuation:        True
==============================================

Allocating memory-mapped sinogram on disk: /home/aaichert/.gemini/antigravity-ide/tmpcb269cx0.bin
Loading and preprocessing projections view-by-view to disk...
Loaded 1/1500 projections...
Loaded 101/1500 projections...
Loaded 201/1500 projections...
Loaded 301/1500 projections...
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Loaded 501/1500 projections...
Loaded 601/1500 projections...
Loaded 701/1500 projections...
Loaded 801/1500 projections...
Loaded 901/1500 projections...
Loaded 1001/1500 projections...
Loaded 1101/1500 projections...
Loaded 1201/1500 projections...
Loaded 1301/1500 projections...
Loaded 1401/1500 projections...
Loaded 1500/1500 projections...
Finished writing sinogram to disk. Copying to ASTRA...
Running FDK...
FDK completed in 3.141 seconds.
Deleted temporary sinogram file: /home/aaichert/.gemini/antigravity-ide/tmpcb269cx0.bin

FDK Reconstruction completed in 188.209 seconds.

Saving final reconstructed volume to: /home/aaichert/nc_local/work/2026_PhD_seminar/geometry_excercises/input/waygate/standard_calc04/processed/reconstructed_volume_uncorrected_fdk.npz
Reconstruction volume saved successfully.

==============================================
             RECONSTRUCTION TIMING SUMMARY     
==============================================
Metadata Reading & Prep:          0.676 seconds
OS-SART Reconstruction Time:    188.209 seconds
----------------------------------------------
Total Execution Time:           196.540 seconds
==============================================

--- Reconstruct Tool Pipeline Completed Successfully ---